PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0283s0016.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 315aa    MW: 34755.9 Da    PI: 4.6491
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0283s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-16119166152
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52 
                          s ykGVr++k +g+W+AeIrd +     +  r++lg++ tae+A ka+ +  ++
  Kalax.0283s0016.1.p 119 SLYKGVRQRK-WGKWAAEIRDpF-----KgVRVWLGTYSTAEDASKAYQRKELE 166
                          57*******9.**********55.....45******************876665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.93E-23119167No hitNo description
SuperFamilySSF541711.31E-16119169IPR016177DNA-binding domain
SMARTSM003805.3E-19120187IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.3E-22120172IPR001471AP2/ERF domain
PfamPF008473.1E-9120162IPR001471AP2/ERF domain
PROSITE profilePS5103220.033120181IPR001471AP2/ERF domain
PRINTSPR003671.6E-9121132IPR001471AP2/ERF domain
PRINTSPR003671.6E-9143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MIKPLLVNPN LTVKSASDSA ASSPVGAAAR FSTKSVRKVR IICSDPYATE SSEDEDEYVI  60
KRSKRIVQEI QLPKLGNLRK ERNEELTPTS SGLYGDENKS CGKRRRMASK PAVRRPSGSL  120
YKGVRQRKWG KWAAEIRDPF KGVRVWLGTY STAEDASKAY QRKELEFKAM AAAIKSHTNL  180
STNEKTDVIA FSNETESGAS NTSSTSTLSE VAGTEKLSGP MEPVIVDGVR EDDTIDPLKT  240
SLLDQEISLG LEFDSMFMDA DLRPMFDDFG SVEDFDFLFD GVEDHTDTDL PEFDINIGST  300
ELAWIEESLN IACP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-15118184370ATERF1
3gcc_A7e-15118184370ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-36ERF family protein